Package: PGRdup 0.2.3.9

PGRdup: Discover Probable Duplicates in Plant Genetic Resources Collections

Provides functions to aid the identification of probable/possible duplicates in Plant Genetic Resources (PGR) collections using 'passport databases' comprising of information records of each constituent sample. These include methods for cleaning the data, creation of a searchable Key Word in Context (KWIC) index of keywords associated with sample records and the identification of nearly identical records with similar information by fuzzy, phonetic and semantic matching of keywords.

Authors:J. Aravind [aut, cre], J. Radhamani [aut], Kalyani Srinivasan [aut], B. Ananda Subhash [aut], Rishi Kumar Tyagi [aut], ICAR-NBGPR [cph], Maurice Aubrey [ctb], Kevin Atkinson [ctb], Lawrence Philips [ctb]

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PGRdup/json (API)
NEWS

Peer review:

Bug tracker:https://github.com/aravind-j/pgrdup/issues

On CRAN:

double-metaphonedouble-metaphone-algorithmnatural-language-processingpgrplant-genetic-resourcesrecord-linkage

20 exports 1 stars 0.94 score 34 dependencies 23 scripts 349 downloads

Last updated 1 years agofrom:90e0e62254. Checks:OK: 4 NOTE: 5. Indexed: yes.

Exports:AddProbDupDataCleanDisProbDupDoubleMetaphoneKWCountsKWICMergeKWMergePrefixMergeProbDupMergeSuffixParseProbDupprint.KWICprint.ProbDupProbDupread.genesysReconstructProbDupReviewProbDupSplitProbDupValidatePrimKeyViewProbDup

Dependencies:clicolorspacecpp11data.tablefansifarverggplot2gluegridExtragtableigraphisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalesstringdiststringitibbleutf8vctrsviridisLitewithr